Zecco charges around $700 for Non-DTC eligible stock trades. It was in a memo they sent out to customers. I saw it reposted in quite a few places around google. Most brokers wont accept transfers of non DTC eligible stocks. TDA will no longer trade them at all I believe.
Scottrade is the only one I have not heard a transfer story about. My guess is that if they still do accept transfers of these accounts they won't continue to do so for very much longer.