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Wednesday, February 08, 2017 11:47:00 AM
Yes, that is the part of the video that I point to in my three recent posts. Starting at 48:10. But stated it in that fashion is not very useful for about 99% of the audience, and even confused LL, as I pointed out.
So I attempted to translate that, and was asking for verification that I translated it correctly. I would appreciate it if you would double check this, but:
1) Wild Type = prevalent genetic type
2) Not 100% certain whether methylated is more prevelant than unmethylated, but this study below observed 2/3 unmethylated, 1/3 methylated, so I am going to assume that unmethylated is generally considered wild type.
https://translational-medicine.biomedcentral.com/articles/10.1186/1479-5876-10-36
On the other hand elsewhere in the report they say that methylation is reported in 30-60% of glioblastoma patients. Best guess from that is 45% which puts it awfully close to 50% which makes the term "wild-type" pretty useless and therefore inappropriate because wild vs not is purely a statement about prevalence. Still, even in this statement they are giving a slight statistical edge to unmethylated, so I will continue to assume that the wild type is unmethylated even though I do not understand why they just wouldn't spell that out.
So LL then stated that the mesenchymals are primarily unmethylated.
But please do check my reasoning and facts here.
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