Pacific Biosciences of California Inc (PACB)

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PacBio Workshop on Genome Sequence Assembly and Analysis
Lausanne, 20 March 2014
Overview
Recent improvements in the Pacific Biosciences RSII technology as well as PacBio data analysis methods have greatly increased the utility of this sequencing platform for both small and large genome sequencing.

To highlight these improvements and applications, and to give potential users an opportunity to discuss with current users how this technology can be incorporated into their sequencing projects, a PacBio Workshop on Genome Sequence Assembly and Analysis will be held in Lausanne.

Application
Registration is not necessary. Attendance is open to all.

Additional information
Location

UNIL - Genopode Building - Auditorium B

For more information, please contact [e-mail]
.Programme
Thursday March 20

14:00 Welcome
Keith Harshman, Genomic Technologies Facility, Center for Integrative Genomics, University of Lausanne

14:05-14:35 De novo assembly of Petunia using PacBio data combined with Illumina data
Rémy Bruggmann, Department of Biology, SIB Swiss Institute of Bioinformatics & University of Bern

14:35-15:05 From phenotypes to genotypes with the human pathogen Candida glabrata
Dominique Sanglard, Institute of Microbiology, CHUV

15:05-15:35 Bacterial genome assembly using PacBio data
Daniel Wüthrich, Department of Biology, SIB Swiss Institute of Bioinformatics & University of Bern

15:35 – 16:05 Coffee Break

16:05-16:35 De novo assembly of a large plant genome with the help of PacBio reads
Emanuel Schmid, Vital-IT, SIB Swiss Institute of Bioinformatics

16:35-17:05 Comparative DNA methylation studies in bacterial genomes
Laurent Falquet, Department of Biology, SIB Swiss Institute of Bioinformatics & University of Fribourg

17:05-17:35 Benefits of SMRT sequencing for analysis of plant and animal genomes
Gerrit Kuhn, Pacific Biosciences

17:35-18:00 Conclusions and General Discussion
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PacBio Workshop on Genome Sequence Assembly and Analysis
Thursday, 20 March, 2:00 PM
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..http://edu.isb-sib.ch/course/view.php?id=174